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bio3d
2.4-1.9000
Tutorials
INTRODUCTORY TUTORIALS
Installing Bio3D
New user guide
Getting started with Bio3D
PDB structure manipulation and analysis
Comparative sequence and structure analysis
Enhanced Normal Modes Analysis
Beginning trajectory analysis with Bio3D
ADVANCED TUTORIALS
Ensemble NMA of E.coli DHFR structures
Ensemble NMA across multiple species of DHFR
Protein structure network analysis with Bio3D
Ensemble Difference Distance Matrix (eDDM) analysis
WEBAPP TUTORIALS
Online protein structure analysis with Bio3D-Web (PDF)
Online Normal Mode Analysis with Bio3D WebApps (To Update)
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Documentation
FAQ
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Grant Lab
Articles
All vignettes
bio3d Vignettes
Bio3D Vignettes
Bio3D Vignettes
Integrating normal modes and correlation network analysis in Bio3D
Protein Structure Networks with Bio3D
Introduction to Ensemble Difference Distance Matrix (eDDM) Analysis
Introduction to Ensemble Difference Distance Matrix (eDDM) Analysis
Ensemble NMA of *E.coli* DHFR structures
Ensemble NMA across multiple species of DHFR
Installing Bio3D
Getting started with Bio3D
Enhanced Normal Modes Analysis with Bio3D
Comparative Protein Structure Analysis with Bio3D
PDB structure manipulation and analysis
Beginning Trajectory Analysis with Bio3D